Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTPN20Q4JDL3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC112504.1-201ENST00000623415 1841 ntBASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC005237.2-201ENST00000434368 219 ntBASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC134684.3-201ENST00000641758 218 ntBASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 AC007950.2-201ENST00000615045 2347 ntBASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTPN20Q4JDL3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AC022188.1-201ENST00000620960 1664 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 KRT18P32-201ENST00000424695 1287 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 GPS2P2-201ENST00000430745 888 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AP006288.1-201ENST00000446065 395 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 RNA5SP410-201ENST00000516285 106 ntBASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTPN20Q4JDL3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms