Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTC1Q2NKJ3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 AC008741.2-201ENST00000612792 3115 ntBASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 REXO1L6P-201ENST00000603433 1515 ntBASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTC1Q2NKJ3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AC005915.1-201ENST00000624912 2018 ntBASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 FAM86MP-201ENST00000340703 885 ntBASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AC092552.1-201ENST00000547243 906 ntBASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 SRD5A3P1-201ENST00000603021 949 ntBASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.35■□□□□ 0.37
CTC1Q2NKJ3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms