Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 KRT18P27-201ENST00000427733 1299 ntBASIC14.16□□□□□ -0.14
UBA52P62987 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.16□□□□□ -0.14
UBA52P62987 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 AC108751.1-201ENST00000490852 363 ntBASIC14.16□□□□□ -0.14
UBA52P62987 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.16□□□□□ -0.14
UBA52P62987 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.16□□□□□ -0.14
UBA52P62987 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.16□□□□□ -0.14
UBA52P62987 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.16□□□□□ -0.14
UBA52P62987 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
UBA52P62987 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 AC073347.1-201ENST00000421633 2643 ntBASIC14.16□□□□□ -0.14
UBA52P62987 PMPCAP1-201ENST00000508114 1576 ntBASIC14.16□□□□□ -0.14
UBA52P62987 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
UBA52P62987 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBA52P62987 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.15□□□□□ -0.14
UBA52P62987 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.15□□□□□ -0.14
UBA52P62987 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 AC211486.1-202ENST00000416371 468 ntBASIC14.15□□□□□ -0.14
UBA52P62987 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.15□□□□□ -0.14
UBA52P62987 DNAJB3-202ENST00000449667 1266 ntBASIC14.15□□□□□ -0.14
UBA52P62987 AC122714.2-201ENST00000502787 707 ntBASIC14.15□□□□□ -0.14
UBA52P62987 AC211476.1-201ENST00000503899 468 ntBASIC14.15□□□□□ -0.14
UBA52P62987 AC136632.2-201ENST00000512891 861 ntBASIC14.15□□□□□ -0.14
UBA52P62987 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.15□□□□□ -0.14
UBA52P62987 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.15□□□□□ -0.14
UBA52P62987 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 AC073592.4-201ENST00000623827 446 ntBASIC14.15□□□□□ -0.14
UBA52P62987 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.15□□□□□ -0.14
UBA52P62987 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBA52P62987 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.15□□□□□ -0.14
UBA52P62987 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
UBA52P62987 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
UBA52P62987 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UBA52P62987 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.14□□□□□ -0.15
UBA52P62987 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBA52P62987 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBA52P62987 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms