Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 AL645728.1-201ENST00000366221 2101 ntBASIC18.81■□□□□ 0.6
HERVK_113P62684 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AC079776.1-201ENST00000401540 1152 ntBASIC18.81■□□□□ 0.6
HERVK_113P62684 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 SDHAP3-202ENST00000515467 728 ntBASIC18.81■□□□□ 0.6
HERVK_113P62684 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AP002490.2-201ENST00000524791 560 ntBASIC18.81■□□□□ 0.6
HERVK_113P62684 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AC004461.2-201ENST00000629517 803 ntBASIC18.81■□□□□ 0.6
HERVK_113P62684 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HERVK_113P62684 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERVK_113P62684 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HERVK_113P62684 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HERVK_113P62684 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
HERVK_113P62684 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HERVK_113P62684 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 RNF216P1-203ENST00000404404 2427 ntBASIC18.8■□□□□ 0.6
HERVK_113P62684 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.8■□□□□ 0.6
HERVK_113P62684 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113P62684 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.8■□□□□ 0.6
HERVK_113P62684 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HERVK_113P62684 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.8■□□□□ 0.6
HERVK_113P62684 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 GPAA1P2-202ENST00000606848 1787 ntBASIC18.8■□□□□ 0.6
HERVK_113P62684 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HERVK_113P62684 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
HERVK_113P62684 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HERVK_113P62684 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113P62684 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113P62684 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.79■□□□□ 0.6
HERVK_113P62684 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.79■□□□□ 0.6
HERVK_113P62684 TPRX2P-201ENST00000535362 881 ntBASIC18.79■□□□□ 0.6
HERVK_113P62684 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.79■□□□□ 0.6
HERVK_113P62684 AC017083.2-201ENST00000608069 979 ntBASIC18.79■□□□□ 0.6
HERVK_113P62684 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.79■□□□□ 0.6
HERVK_113P62684 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HERVK_113P62684 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
HERVK_113P62684 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HERVK_113P62684 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms