Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.68□□□□□ -0.06
VBP1P61758 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VBP1P61758 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VBP1P61758 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.68□□□□□ -0.06
VBP1P61758 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VBP1P61758 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.68□□□□□ -0.06
VBP1P61758 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.68□□□□□ -0.06
VBP1P61758 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 ZNF444P1-201ENST00000559497 298 ntBASIC14.67□□□□□ -0.06
VBP1P61758 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.67□□□□□ -0.06
VBP1P61758 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.67□□□□□ -0.06
VBP1P61758 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.67□□□□□ -0.06
VBP1P61758 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 GPAA1P2-202ENST00000606848 1787 ntBASIC14.67□□□□□ -0.06
VBP1P61758 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
VBP1P61758 SBF1P1-201ENST00000444527 5631 ntBASIC14.67□□□□□ -0.06
VBP1P61758 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 AC013726.1-201ENST00000563747 2285 ntBASIC14.67□□□□□ -0.06
VBP1P61758 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.67□□□□□ -0.06
VBP1P61758 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
VBP1P61758 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 KRT8P39-201ENST00000396270 1433 ntBASIC14.66□□□□□ -0.06
VBP1P61758 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VBP1P61758 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
VBP1P61758 AC012618.2-201ENST00000428058 849 ntBASIC14.66□□□□□ -0.06
VBP1P61758 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 NUS1P1-201ENST00000446295 882 ntBASIC14.66□□□□□ -0.06
VBP1P61758 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.66□□□□□ -0.06
VBP1P61758 AC233702.5-201ENST00000584107 538 ntBASIC14.66□□□□□ -0.06
VBP1P61758 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.66□□□□□ -0.06
VBP1P61758 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
VBP1P61758 AC041040.2-201ENST00000622926 2899 ntBASIC14.66□□□□□ -0.06
VBP1P61758 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
VBP1P61758 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
VBP1P61758 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms