Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 KLF2P3-201ENST00000451977 1087 ntBASIC17.78■□□□□ 0.44
NCKAP1LP55160 AC067863.1-201ENST00000494933 530 ntBASIC17.78■□□□□ 0.44
NCKAP1LP55160 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AC026979.3-201ENST00000607315 403 ntBASIC17.78■□□□□ 0.44
NCKAP1LP55160 RN7SL828P-201ENST00000607615 303 ntBASIC17.78■□□□□ 0.44
NCKAP1LP55160 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NCKAP1LP55160 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
NCKAP1LP55160 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 AL391005.1-201ENST00000623953 2435 ntBASIC17.77■□□□□ 0.44
NCKAP1LP55160 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 FAM86GP-201ENST00000448322 971 ntBASIC17.77■□□□□ 0.44
NCKAP1LP55160 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NCKAP1LP55160 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 AL691432.1-201ENST00000596308 1422 ntBASIC17.77■□□□□ 0.44
NCKAP1LP55160 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
NCKAP1LP55160 AL513523.2-202ENST00000427283 2040 ntBASIC17.77■□□□□ 0.43
NCKAP1LP55160 AC026691.1-201ENST00000602502 2017 ntBASIC17.77■□□□□ 0.43
NCKAP1LP55160 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NCKAP1LP55160 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
NCKAP1LP55160 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCKAP1LP55160 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCKAP1LP55160 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NCKAP1LP55160 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 CYP4F24P-201ENST00000586049 1580 ntBASIC17.76■□□□□ 0.43
NCKAP1LP55160 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NCKAP1LP55160 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NCKAP1LP55160 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms