Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
EPHA4P54764 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.66■□□□□ 0.1
EPHA4P54764 PIN1P1-201ENST00000412108 996 ntBASIC15.66■□□□□ 0.1
EPHA4P54764 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.66■□□□□ 0.1
EPHA4P54764 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.66■□□□□ 0.1
EPHA4P54764 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.66■□□□□ 0.1
EPHA4P54764 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 AC009407.1-201ENST00000568958 598 ntBASIC15.66■□□□□ 0.1
EPHA4P54764 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC15.66■□□□□ 0.1
EPHA4P54764 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.66■□□□□ 0.1
EPHA4P54764 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
EPHA4P54764 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EPHA4P54764 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.66■□□□□ 0.1
EPHA4P54764 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.66■□□□□ 0.1
EPHA4P54764 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EPHA4P54764 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EPHA4P54764 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.65■□□□□ 0.1
EPHA4P54764 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
EPHA4P54764 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHA4P54764 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 AC245100.5-201ENST00000452108 331 ntBASIC15.65■□□□□ 0.1
EPHA4P54764 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.65■□□□□ 0.1
EPHA4P54764 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHA4P54764 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
EPHA4P54764 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.65■□□□□ 0.1
EPHA4P54764 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 AC027307.3-201ENST00000594262 1100 ntBASIC15.65■□□□□ 0.1
EPHA4P54764 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
EPHA4P54764 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.65■□□□□ 0.1
EPHA4P54764 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
EPHA4P54764 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
EPHA4P54764 AL513477.1-201ENST00000602865 2407 ntBASIC15.65■□□□□ 0.1
EPHA4P54764 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EPHA4P54764 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
EPHA4P54764 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.64■□□□□ 0.1
EPHA4P54764 RN7SL832P-201ENST00000607781 1756 ntBASIC15.64■□□□□ 0.1
EPHA4P54764 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.64■□□□□ 0.09
EPHA4P54764 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
EPHA4P54764 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
EPHA4P54764 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.64■□□□□ 0.09
EPHA4P54764 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 AC015922.1-201ENST00000421102 1152 ntBASIC15.64■□□□□ 0.09
EPHA4P54764 SPTLC1P1-201ENST00000447199 261 ntBASIC15.64■□□□□ 0.09
EPHA4P54764 CRB3P1-201ENST00000449338 276 ntBASIC15.64■□□□□ 0.09
EPHA4P54764 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
EPHA4P54764 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.64■□□□□ 0.09
EPHA4P54764 AC010336.2-201ENST00000564226 506 ntBASIC15.64■□□□□ 0.09
EPHA4P54764 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EPHA4P54764 AC004233.3-201ENST00000607794 1269 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms