Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LIMK1P53667 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK1P53667 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LIMK1P53667 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK1P53667 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 RNA5SP410-201ENST00000516285 106 ntBASIC16.05■□□□□ 0.16
LIMK1P53667 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.05■□□□□ 0.16
LIMK1P53667 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.05■□□□□ 0.16
LIMK1P53667 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.05■□□□□ 0.16
LIMK1P53667 AL033527.5-201ENST00000641382 801 ntBASIC16.05■□□□□ 0.16
LIMK1P53667 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.05■□□□□ 0.16
LIMK1P53667 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
LIMK1P53667 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LIMK1P53667 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK1P53667 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 RNA5SP412-201ENST00000516234 123 ntBASIC16.04■□□□□ 0.16
LIMK1P53667 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK1P53667 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.04■□□□□ 0.16
LIMK1P53667 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 AC004461.2-201ENST00000629517 803 ntBASIC16.04■□□□□ 0.16
LIMK1P53667 AL033527.5-202ENST00000641632 1098 ntBASIC16.04■□□□□ 0.16
LIMK1P53667 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LIMK1P53667 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
LIMK1P53667 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LIMK1P53667 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LIMK1P53667 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LIMK1P53667 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LIMK1P53667 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.03■□□□□ 0.16
LIMK1P53667 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.03■□□□□ 0.16
LIMK1P53667 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.03■□□□□ 0.16
LIMK1P53667 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LIMK1P53667 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms