Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AC140658.5-201ENST00000438532 169 ntBASIC14.48□□□□□ -0.09
SLC25A1P53007 AC093909.1-201ENST00000504731 1122 ntBASIC14.48□□□□□ -0.09
SLC25A1P53007 RNA5SP415-201ENST00000517246 115 ntBASIC14.48□□□□□ -0.09
SLC25A1P53007 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 AC104692.2-201ENST00000603054 253 ntBASIC14.48□□□□□ -0.09
SLC25A1P53007 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 AL031008.1-201ENST00000619963 541 ntBASIC14.48□□□□□ -0.09
SLC25A1P53007 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SLC25A1P53007 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SLC25A1P53007 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SLC25A1P53007 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 AL589702.1-201ENST00000641229 1509 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 PRAL-201ENST00000624952 3286 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC25A1P53007 IGHV3-22-201ENST00000520721 359 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 AC002347.1-201ENST00000569543 541 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.47□□□□□ -0.09
SLC25A1P53007 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SLC25A1P53007 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.47□□□□□ -0.09
SLC25A1P53007 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 MIR4321-201ENST00000592276 80 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SLC25A1P53007 AC073439.1-201ENST00000624121 1774 ntBASIC14.47□□□□□ -0.09
SLC25A1P53007 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SLC25A1P53007 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.47□□□□□ -0.09
SLC25A1P53007 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 AC103702.1-201ENST00000548801 2630 ntBASIC14.46□□□□□ -0.09
SLC25A1P53007 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SLC25A1P53007 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SLC25A1P53007 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 AP001282.1-201ENST00000531301 1499 ntBASIC14.46□□□□□ -0.09
SLC25A1P53007 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.46□□□□□ -0.09
SLC25A1P53007 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SLC25A1P53007 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms