Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.94■□□□□ 0.78
NUP98P52948 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.94■□□□□ 0.78
NUP98P52948 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 KRT18P43-201ENST00000469825 1281 ntBASIC19.94■□□□□ 0.78
NUP98P52948 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.94■□□□□ 0.78
NUP98P52948 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
NUP98P52948 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NUP98P52948 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.94■□□□□ 0.78
NUP98P52948 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUP98P52948 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
NUP98P52948 REXO1L6P-201ENST00000603433 1515 ntBASIC19.94■□□□□ 0.78
NUP98P52948 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.93■□□□□ 0.78
NUP98P52948 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NUP98P52948 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP98P52948 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP98P52948 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP98P52948 AC099336.1-201ENST00000417053 1171 ntBASIC19.93■□□□□ 0.78
NUP98P52948 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 AC092658.1-201ENST00000505836 891 ntBASIC19.93■□□□□ 0.78
NUP98P52948 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP98P52948 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.93■□□□□ 0.78
NUP98P52948 AL606495.2-201ENST00000605867 535 ntBASIC19.93■□□□□ 0.78
NUP98P52948 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.93■□□□□ 0.78
NUP98P52948 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.93■□□□□ 0.78
NUP98P52948 AL607033.1-201ENST00000623900 1599 ntBASIC19.93■□□□□ 0.78
NUP98P52948 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NUP98P52948 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NUP98P52948 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NUP98P52948 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 TP73-209ENST00000603362 1668 ntTSL 5 BASIC19.93■□□□□ 0.78
NUP98P52948 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUP98P52948 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
NUP98P52948 AC012441.1-201ENST00000446669 685 ntBASIC19.92■□□□□ 0.78
NUP98P52948 AC106760.1-201ENST00000508690 800 ntBASIC19.92■□□□□ 0.78
NUP98P52948 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.92■□□□□ 0.78
NUP98P52948 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.92■□□□□ 0.78
NUP98P52948 AC005252.2-201ENST00000624630 1141 ntBASIC19.92■□□□□ 0.78
NUP98P52948 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NUP98P52948 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NUP98P52948 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.92■□□□□ 0.78
NUP98P52948 VDAC1P7-201ENST00000462417 847 ntBASIC19.92■□□□□ 0.78
NUP98P52948 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.92■□□□□ 0.78
NUP98P52948 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.92■□□□□ 0.78
NUP98P52948 AL022328.1-201ENST00000610050 478 ntBASIC19.92■□□□□ 0.78
NUP98P52948 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUP98P52948 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 MSTO2P-201ENST00000314835 1709 ntBASIC19.92■□□□□ 0.78
NUP98P52948 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUP98P52948 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NUP98P52948 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUP98P52948 AL133267.1-201ENST00000398220 340 ntBASIC19.91■□□□□ 0.78
NUP98P52948 BOLA2P3-201ENST00000404566 256 ntBASIC19.91■□□□□ 0.78
NUP98P52948 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.91■□□□□ 0.78
NUP98P52948 RPL7P3-201ENST00000441388 714 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms