Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 OR8S1-201ENST00000310194 1080 ntBASIC15.81■□□□□ 0.12
PDX1P52945 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.81■□□□□ 0.12
PDX1P52945 AC007274.1-201ENST00000439805 662 ntBASIC15.81■□□□□ 0.12
PDX1P52945 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 AC087499.5-201ENST00000452760 1342 ntBASIC15.81■□□□□ 0.12
PDX1P52945 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.81■□□□□ 0.12
PDX1P52945 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
PDX1P52945 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.81■□□□□ 0.12
PDX1P52945 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.81■□□□□ 0.12
PDX1P52945 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.81■□□□□ 0.12
PDX1P52945 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PDX1P52945 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 AC004840.1-201ENST00000636359 365 ntBASIC15.81■□□□□ 0.12
PDX1P52945 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PDX1P52945 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PDX1P52945 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 TUBB8P12-201ENST00000308911 1335 ntBASIC15.8■□□□□ 0.12
PDX1P52945 TUBB7P-202ENST00000428444 1305 ntBASIC15.8■□□□□ 0.12
PDX1P52945 TUBB8P7-204ENST00000567960 1332 ntBASIC15.8■□□□□ 0.12
PDX1P52945 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 AL080243.2-201ENST00000418783 582 ntBASIC15.8■□□□□ 0.12
PDX1P52945 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.8■□□□□ 0.12
PDX1P52945 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.8■□□□□ 0.12
PDX1P52945 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.8■□□□□ 0.12
PDX1P52945 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.8■□□□□ 0.12
PDX1P52945 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.8■□□□□ 0.12
PDX1P52945 RN7SL828P-201ENST00000607615 303 ntBASIC15.8■□□□□ 0.12
PDX1P52945 AL133215.2-201ENST00000609242 977 ntBASIC15.8■□□□□ 0.12
PDX1P52945 SPTSSB-204ENST00000617024 1292 ntBASIC15.8■□□□□ 0.12
PDX1P52945 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
PDX1P52945 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.8■□□□□ 0.12
PDX1P52945 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.8■□□□□ 0.12
PDX1P52945 SNX33P1-201ENST00000592116 1762 ntBASIC15.8■□□□□ 0.12
PDX1P52945 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.8■□□□□ 0.12
PDX1P52945 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PDX1P52945 AC006277.1-201ENST00000624348 1610 ntBASIC15.79■□□□□ 0.12
PDX1P52945 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PDX1P52945 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.79■□□□□ 0.12
PDX1P52945 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms