Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RAB5CP51148 AL353593.2-201ENST00000602529 1483 ntBASIC13.16□□□□□ -0.3
RAB5CP51148 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 AL512652.2-201ENST00000625156 1716 ntBASIC13.16□□□□□ -0.3
RAB5CP51148 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 MROH4P-201ENST00000431302 1578 ntBASIC13.16□□□□□ -0.3
RAB5CP51148 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB5CP51148 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.16□□□□□ -0.3
RAB5CP51148 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 CR383656.2-201ENST00000548656 2254 ntBASIC13.16□□□□□ -0.3
RAB5CP51148 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.16□□□□□ -0.3
RAB5CP51148 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.16□□□□□ -0.3
RAB5CP51148 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5CP51148 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.16□□□□□ -0.3
RAB5CP51148 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RAB5CP51148 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 AP002414.1-201ENST00000391405 1147 ntBASIC13.15□□□□□ -0.3
RAB5CP51148 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 AC107956.1-201ENST00000494359 873 ntBASIC13.15□□□□□ -0.3
RAB5CP51148 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.15□□□□□ -0.3
RAB5CP51148 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.15□□□□□ -0.3
RAB5CP51148 REXO1L10P-201ENST00000615707 1290 ntBASIC13.15□□□□□ -0.3
RAB5CP51148 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 REXO1L12P-201ENST00000622156 912 ntBASIC13.15□□□□□ -0.3
RAB5CP51148 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC13.15□□□□□ -0.3
RAB5CP51148 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RAB5CP51148 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB5CP51148 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms