Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A1P43005 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.07■□□□□ 0.32
SLC1A1P43005 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC1A1P43005 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC1A1P43005 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 AL161645.1-201ENST00000622716 1255 ntBASIC17.07■□□□□ 0.32
SLC1A1P43005 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A1P43005 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC1A1P43005 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A1P43005 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A1P43005 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A1P43005 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 TPM4P1-201ENST00000436100 807 ntBASIC17.06■□□□□ 0.32
SLC1A1P43005 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC1A1P43005 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC1A1P43005 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 KRT19P2-202ENST00000557173 1012 ntBASIC17.06■□□□□ 0.32
SLC1A1P43005 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC1A1P43005 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A1P43005 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A1P43005 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC1A1P43005 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC1A1P43005 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC1A1P43005 AC011477.6-201ENST00000604980 1927 ntBASIC17.06■□□□□ 0.32
SLC1A1P43005 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A1P43005 WASH6P-202ENST00000359512 1437 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC092384.3-202ENST00000564646 2873 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A1P43005 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SLC1A1P43005 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.05■□□□□ 0.32
SLC1A1P43005 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC002347.1-201ENST00000569543 541 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 MIR4321-201ENST00000592276 80 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC064836.3-201ENST00000607928 673 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SLC1A1P43005 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SLC1A1P43005 AC104640.1-201ENST00000562617 2109 ntBASIC17.05■□□□□ 0.32
SLC1A1P43005 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 AC022532.1-201ENST00000624563 1728 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.04■□□□□ 0.32
SLC1A1P43005 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SLC1A1P43005 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 PMS2P7-201ENST00000506558 1336 ntBASIC17.04■□□□□ 0.32
SLC1A1P43005 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SLC1A1P43005 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms