Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 AP002472.1-201ENST00000577490 586 ntBASIC16.53■□□□□ 0.24
HADHAP40939 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.53■□□□□ 0.24
HADHAP40939 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHAP40939 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HADHAP40939 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHAP40939 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 AC068587.6-202ENST00000641839 5619 ntBASIC16.52■□□□□ 0.24
HADHAP40939 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 AC024909.3-201ENST00000611513 2257 ntBASIC16.52■□□□□ 0.24
HADHAP40939 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HADHAP40939 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 KRT18P13-201ENST00000400056 1290 ntBASIC16.52■□□□□ 0.24
HADHAP40939 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.52■□□□□ 0.24
HADHAP40939 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.52■□□□□ 0.24
HADHAP40939 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHAP40939 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HADHAP40939 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHAP40939 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHAP40939 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HADHAP40939 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HADHAP40939 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.52■□□□□ 0.23
HADHAP40939 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 AC092919.2-201ENST00000623631 1645 ntBASIC16.52■□□□□ 0.23
HADHAP40939 AC008741.2-201ENST00000612792 3115 ntBASIC16.52■□□□□ 0.23
HADHAP40939 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHAP40939 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 AC126755.1-201ENST00000525846 6405 ntBASIC16.51■□□□□ 0.23
HADHAP40939 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
HADHAP40939 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HADHAP40939 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HADHAP40939 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHAP40939 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HADHAP40939 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 AC023274.1-201ENST00000418278 595 ntBASIC16.51■□□□□ 0.23
HADHAP40939 POLD2P1-201ENST00000511220 997 ntBASIC16.51■□□□□ 0.23
HADHAP40939 PGAM5P1-201ENST00000518923 814 ntBASIC16.51■□□□□ 0.23
HADHAP40939 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HADHAP40939 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.51■□□□□ 0.23
HADHAP40939 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 AL078644.1-201ENST00000609881 752 ntBASIC16.51■□□□□ 0.23
HADHAP40939 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HADHAP40939 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
HADHAP40939 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHAP40939 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.51■□□□□ 0.23
HADHAP40939 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHAP40939 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HADHAP40939 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HADHAP40939 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms