Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC3P40938 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RFC3P40938 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
RFC3P40938 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
RFC3P40938 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.96□□□□□ -0.02
RFC3P40938 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.95□□□□□ -0.02
RFC3P40938 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RFC3P40938 HLA-H-201ENST00000383620 1096 ntBASIC14.95□□□□□ -0.02
RFC3P40938 AC236430.1-201ENST00000402231 743 ntBASIC14.95□□□□□ -0.02
RFC3P40938 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 MTND6P24-201ENST00000440466 518 ntBASIC14.95□□□□□ -0.02
RFC3P40938 TSPY16P-201ENST00000449843 468 ntBASIC14.95□□□□□ -0.02
RFC3P40938 AC027369.6-201ENST00000525520 931 ntBASIC14.95□□□□□ -0.02
RFC3P40938 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.95□□□□□ -0.02
RFC3P40938 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.95□□□□□ -0.02
RFC3P40938 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 AC138761.1-201ENST00000584393 385 ntBASIC14.95□□□□□ -0.02
RFC3P40938 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.95□□□□□ -0.02
RFC3P40938 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 AL158211.3-201ENST00000607385 239 ntBASIC14.95□□□□□ -0.02
RFC3P40938 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
RFC3P40938 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.95□□□□□ -0.02
RFC3P40938 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.95□□□□□ -0.02
RFC3P40938 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RFC3P40938 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
RFC3P40938 AL136379.1-201ENST00000623471 2642 ntBASIC14.95□□□□□ -0.02
RFC3P40938 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFC3P40938 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFC3P40938 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 MIR661-201ENST00000384842 89 ntBASIC14.94□□□□□ -0.02
RFC3P40938 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.94□□□□□ -0.02
RFC3P40938 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RFC3P40938 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.94□□□□□ -0.02
RFC3P40938 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.94□□□□□ -0.02
RFC3P40938 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 SPDYE12P-201ENST00000618416 771 ntBASIC14.94□□□□□ -0.02
RFC3P40938 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
RFC3P40938 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RFC3P40938 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
RFC3P40938 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.94□□□□□ -0.02
RFC3P40938 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms