Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.34□□□□□ -0.27
CEACAM3P40198 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 AC092850.2-201ENST00000623821 2697 ntBASIC13.34□□□□□ -0.27
CEACAM3P40198 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CEACAM3P40198 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.34□□□□□ -0.27
CEACAM3P40198 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.33□□□□□ -0.27
CEACAM3P40198 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.33□□□□□ -0.27
CEACAM3P40198 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.33□□□□□ -0.27
CEACAM3P40198 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
CEACAM3P40198 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.33□□□□□ -0.28
CEACAM3P40198 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
CEACAM3P40198 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AC079140.1-201ENST00000508039 487 ntBASIC13.33□□□□□ -0.28
CEACAM3P40198 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.33□□□□□ -0.28
CEACAM3P40198 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AC023511.2-201ENST00000618803 211 ntBASIC13.33□□□□□ -0.28
CEACAM3P40198 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.33□□□□□ -0.28
CEACAM3P40198 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CEACAM3P40198 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CEACAM3P40198 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CEACAM3P40198 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 AC073439.1-201ENST00000624121 1774 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CEACAM3P40198 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.32□□□□□ -0.28
CEACAM3P40198 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.32□□□□□ -0.28
CEACAM3P40198 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.32□□□□□ -0.28
CEACAM3P40198 ADH5P3-201ENST00000433842 1137 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AC005237.2-201ENST00000434368 219 ntBASIC13.32□□□□□ -0.28
CEACAM3P40198 AL592309.1-201ENST00000443127 649 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms