Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 AC008677.1-201ENST00000519230 1561 ntBASIC16.19■□□□□ 0.18
HMGCLP35914 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 HAUS4P1-201ENST00000406739 1145 ntBASIC16.19■□□□□ 0.18
HMGCLP35914 TSEN15P1-201ENST00000423257 515 ntBASIC16.19■□□□□ 0.18
HMGCLP35914 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCLP35914 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.19■□□□□ 0.18
HMGCLP35914 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCLP35914 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.19■□□□□ 0.18
HMGCLP35914 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.19■□□□□ 0.18
HMGCLP35914 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCLP35914 LINC00628-201ENST00000628516 1289 ntBASIC16.19■□□□□ 0.18
HMGCLP35914 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HMGCLP35914 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HMGCLP35914 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
HMGCLP35914 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HMGCLP35914 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HMGCLP35914 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 SPDYE7P-202ENST00000420373 878 ntBASIC16.18■□□□□ 0.18
HMGCLP35914 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HMGCLP35914 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.18■□□□□ 0.18
HMGCLP35914 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.18■□□□□ 0.18
HMGCLP35914 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 AL603832.2-201ENST00000566195 2125 ntBASIC16.18■□□□□ 0.18
HMGCLP35914 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HMGCLP35914 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGCLP35914 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCLP35914 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HMGCLP35914 AL139400.1-201ENST00000366220 510 ntBASIC16.17■□□□□ 0.18
HMGCLP35914 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCLP35914 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms