Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.54■□□□□ 0.24
RPA3P35244 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.54■□□□□ 0.24
RPA3P35244 AC116407.3-201ENST00000623905 1129 ntBASIC16.54■□□□□ 0.24
RPA3P35244 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
RPA3P35244 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPA3P35244 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 AC016027.1-202ENST00000607927 1699 ntBASIC16.53■□□□□ 0.24
RPA3P35244 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.53■□□□□ 0.24
RPA3P35244 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RPA3P35244 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.53■□□□□ 0.24
RPA3P35244 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 AC098831.1-202ENST00000438821 336 ntBASIC16.53■□□□□ 0.24
RPA3P35244 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 AC010654.1-201ENST00000615722 808 ntBASIC16.53■□□□□ 0.24
RPA3P35244 GGTLC5P-201ENST00000617623 998 ntBASIC16.53■□□□□ 0.24
RPA3P35244 AC117500.6-201ENST00000624871 588 ntBASIC16.53■□□□□ 0.24
RPA3P35244 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.53■□□□□ 0.24
RPA3P35244 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.53■□□□□ 0.24
RPA3P35244 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 AC006058.4-201ENST00000624016 1670 ntBASIC16.53■□□□□ 0.24
RPA3P35244 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPA3P35244 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.52■□□□□ 0.24
RPA3P35244 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RPA3P35244 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RPA3P35244 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.52■□□□□ 0.24
RPA3P35244 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.52■□□□□ 0.24
RPA3P35244 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.52■□□□□ 0.24
RPA3P35244 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.52■□□□□ 0.24
RPA3P35244 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
RPA3P35244 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RPA3P35244 AF228730.7-201ENST00000641842 219 ntBASIC16.52■□□□□ 0.24
RPA3P35244 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.52■□□□□ 0.24
RPA3P35244 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPA3P35244 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RPA3P35244 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RPA3P35244 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RPA3P35244 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RPA3P35244 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPA3P35244 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 AC131009.4-201ENST00000624048 1740 ntBASIC16.51■□□□□ 0.23
RPA3P35244 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 AP003680.1-201ENST00000598970 3660 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms