Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CKS2P33552 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.06□□□□□ -0.48
CKS2P33552 AL512652.2-201ENST00000625156 1716 ntBASIC12.06□□□□□ -0.48
CKS2P33552 TMBIM7P-203ENST00000641617 1718 ntBASIC12.06□□□□□ -0.48
CKS2P33552 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 Z83836.1-201ENST00000624605 1642 ntBASIC12.05□□□□□ -0.48
CKS2P33552 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
CKS2P33552 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 MIR718-201ENST00000390190 70 ntBASIC12.05□□□□□ -0.48
CKS2P33552 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 STARP1-201ENST00000397973 869 ntBASIC12.05□□□□□ -0.48
CKS2P33552 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.05□□□□□ -0.48
CKS2P33552 SPDYE15P-201ENST00000424157 909 ntBASIC12.05□□□□□ -0.48
CKS2P33552 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.05□□□□□ -0.48
CKS2P33552 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.05□□□□□ -0.48
CKS2P33552 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC12.05□□□□□ -0.48
CKS2P33552 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 AC016027.1-202ENST00000607927 1699 ntBASIC12.05□□□□□ -0.48
CKS2P33552 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CKS2P33552 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.05□□□□□ -0.48
CKS2P33552 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CKS2P33552 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.05□□□□□ -0.48
CKS2P33552 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CKS2P33552 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CKS2P33552 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.04□□□□□ -0.48
CKS2P33552 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.04□□□□□ -0.48
CKS2P33552 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.04□□□□□ -0.48
CKS2P33552 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.04□□□□□ -0.48
CKS2P33552 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.04□□□□□ -0.48
CKS2P33552 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.04□□□□□ -0.48
CKS2P33552 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.04□□□□□ -0.48
CKS2P33552 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CKS2P33552 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 SIGLEC30P-201ENST00000455569 941 ntBASIC12.04□□□□□ -0.48
CKS2P33552 AC098590.1-201ENST00000468126 897 ntBASIC12.04□□□□□ -0.48
CKS2P33552 AC092597.1-201ENST00000487352 616 ntBASIC12.04□□□□□ -0.48
CKS2P33552 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.04□□□□□ -0.48
CKS2P33552 AL355075.4-201ENST00000554988 638 ntBASIC12.04□□□□□ -0.48
CKS2P33552 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.04□□□□□ -0.48
CKS2P33552 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC12.04□□□□□ -0.48
CKS2P33552 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CKS2P33552 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.04□□□□□ -0.48
CKS2P33552 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CKS2P33552 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms