Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.45■□□□□ 0.22
VCLP18206 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 U1.21-201ENST00000580816 167 ntBASIC16.45■□□□□ 0.22
VCLP18206 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.45■□□□□ 0.22
VCLP18206 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
VCLP18206 AC021097.1-201ENST00000607902 574 ntBASIC16.45■□□□□ 0.22
VCLP18206 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.45■□□□□ 0.22
VCLP18206 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.45■□□□□ 0.22
VCLP18206 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.45■□□□□ 0.22
VCLP18206 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
VCLP18206 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
VCLP18206 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 AC144831.1-201ENST00000573312 2656 ntBASIC16.44■□□□□ 0.22
VCLP18206 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.44■□□□□ 0.22
VCLP18206 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.44■□□□□ 0.22
VCLP18206 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 AC004967.1-201ENST00000453589 447 ntBASIC16.44■□□□□ 0.22
VCLP18206 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.44■□□□□ 0.22
VCLP18206 YBX1P5-201ENST00000509441 847 ntBASIC16.44■□□□□ 0.22
VCLP18206 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.44■□□□□ 0.22
VCLP18206 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.44■□□□□ 0.22
VCLP18206 MIR4469-201ENST00000583919 79 ntBASIC16.44■□□□□ 0.22
VCLP18206 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
VCLP18206 AL009183.1-201ENST00000603760 355 ntBASIC16.44■□□□□ 0.22
VCLP18206 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
VCLP18206 AC139530.3-201ENST00000620344 690 ntBASIC16.44■□□□□ 0.22
VCLP18206 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.44■□□□□ 0.22
VCLP18206 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.44■□□□□ 0.22
VCLP18206 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 AC092364.2-201ENST00000596710 2692 ntBASIC16.44■□□□□ 0.22
VCLP18206 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 AC092919.2-201ENST00000623631 1645 ntBASIC16.44■□□□□ 0.22
VCLP18206 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
VCLP18206 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
VCLP18206 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.44■□□□□ 0.22
VCLP18206 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
VCLP18206 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
VCLP18206 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.43■□□□□ 0.22
VCLP18206 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.43■□□□□ 0.22
VCLP18206 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.43■□□□□ 0.22
VCLP18206 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.43■□□□□ 0.22
VCLP18206 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VCLP18206 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.43■□□□□ 0.22
VCLP18206 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.43■□□□□ 0.22
VCLP18206 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.43■□□□□ 0.22
VCLP18206 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.43■□□□□ 0.22
VCLP18206 AL691403.2-201ENST00000618460 490 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms