Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
DEFA4P12838 ME2P1-201ENST00000426028 1970 ntBASIC13.34□□□□□ -0.27
DEFA4P12838 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.34□□□□□ -0.27
DEFA4P12838 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
DEFA4P12838 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.34□□□□□ -0.27
DEFA4P12838 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.34□□□□□ -0.27
DEFA4P12838 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA4P12838 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
DEFA4P12838 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA4P12838 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.27
DEFA4P12838 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.33□□□□□ -0.27
DEFA4P12838 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
DEFA4P12838 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.33□□□□□ -0.27
DEFA4P12838 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
DEFA4P12838 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 AC104640.1-201ENST00000562617 2109 ntBASIC13.33□□□□□ -0.28
DEFA4P12838 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 RPS2P28-201ENST00000314255 741 ntBASIC13.33□□□□□ -0.28
DEFA4P12838 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 OR7E14P-202ENST00000530490 1290 ntBASIC13.33□□□□□ -0.28
DEFA4P12838 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.33□□□□□ -0.28
DEFA4P12838 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 AC021087.4-201ENST00000563761 564 ntBASIC13.33□□□□□ -0.28
DEFA4P12838 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.33□□□□□ -0.28
DEFA4P12838 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.33□□□□□ -0.28
DEFA4P12838 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.33□□□□□ -0.28
DEFA4P12838 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DEFA4P12838 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 PRAL-201ENST00000624952 3286 ntBASIC13.32□□□□□ -0.28
DEFA4P12838 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.32□□□□□ -0.28
DEFA4P12838 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 PTCHD3P3-201ENST00000403073 906 ntBASIC13.32□□□□□ -0.28
DEFA4P12838 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
DEFA4P12838 AF238378.1-201ENST00000526806 358 ntBASIC13.32□□□□□ -0.28
DEFA4P12838 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DEFA4P12838 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.32□□□□□ -0.28
DEFA4P12838 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.32□□□□□ -0.28
DEFA4P12838 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
DEFA4P12838 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms