Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.7■□□□□ 0.58
BMP3P12645 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BMP3P12645 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.7■□□□□ 0.58
BMP3P12645 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP3P12645 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.7■□□□□ 0.58
BMP3P12645 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP3P12645 AC025048.6-201ENST00000634326 1161 ntBASIC18.7■□□□□ 0.58
BMP3P12645 AL109936.8-201ENST00000641772 604 ntBASIC18.7■□□□□ 0.58
BMP3P12645 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP3P12645 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.7■□□□□ 0.58
BMP3P12645 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BMP3P12645 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BMP3P12645 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BMP3P12645 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BMP3P12645 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 FO393414.2-201ENST00000405153 598 ntBASIC18.69■□□□□ 0.58
BMP3P12645 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.69■□□□□ 0.58
BMP3P12645 HIST3H2BA-201ENST00000436555 524 ntBASIC18.69■□□□□ 0.58
BMP3P12645 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.69■□□□□ 0.58
BMP3P12645 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.69■□□□□ 0.58
BMP3P12645 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BMP3P12645 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
BMP3P12645 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
BMP3P12645 AC004790.1-201ENST00000612686 536 ntBASIC18.69■□□□□ 0.58
BMP3P12645 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.69■□□□□ 0.58
BMP3P12645 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BMP3P12645 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BMP3P12645 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BMP3P12645 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
BMP3P12645 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.68■□□□□ 0.58
BMP3P12645 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BMP3P12645 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 AC004987.2-201ENST00000395959 1148 ntBASIC18.68■□□□□ 0.58
BMP3P12645 AC005034.1-201ENST00000426657 489 ntBASIC18.68■□□□□ 0.58
BMP3P12645 AL353779.1-201ENST00000434793 351 ntBASIC18.68■□□□□ 0.58
BMP3P12645 DOC2GP-202ENST00000514950 1163 ntBASIC18.68■□□□□ 0.58
BMP3P12645 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.68■□□□□ 0.58
BMP3P12645 API5-211ENST00000534695 560 ntTSL 5 BASIC18.68■□□□□ 0.58
BMP3P12645 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BMP3P12645 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.68■□□□□ 0.58
BMP3P12645 AL035252.4-201ENST00000624174 288 ntBASIC18.68■□□□□ 0.58
BMP3P12645 AC004461.2-201ENST00000629517 803 ntBASIC18.68■□□□□ 0.58
BMP3P12645 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
BMP3P12645 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.68■□□□□ 0.58
BMP3P12645 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BMP3P12645 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BMP3P12645 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.68■□□□□ 0.58
BMP3P12645 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BMP3P12645 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
BMP3P12645 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BMP3P12645 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BMP3P12645 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms