Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EPB41P11171 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EPB41P11171 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.93■□□□□ 0.46
EPB41P11171 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
EPB41P11171 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
EPB41P11171 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
EPB41P11171 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EPB41P11171 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
EPB41P11171 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.93■□□□□ 0.46
EPB41P11171 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
EPB41P11171 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
EPB41P11171 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.92■□□□□ 0.46
EPB41P11171 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
EPB41P11171 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.92■□□□□ 0.46
EPB41P11171 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
EPB41P11171 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
EPB41P11171 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 AC024909.3-201ENST00000611513 2257 ntBASIC17.92■□□□□ 0.46
EPB41P11171 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 AC092850.2-201ENST00000623821 2697 ntBASIC17.92■□□□□ 0.46
EPB41P11171 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.92■□□□□ 0.46
EPB41P11171 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.92■□□□□ 0.46
EPB41P11171 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
EPB41P11171 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
EPB41P11171 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.91■□□□□ 0.46
EPB41P11171 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
EPB41P11171 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.91■□□□□ 0.46
EPB41P11171 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPB41P11171 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
EPB41P11171 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
EPB41P11171 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.91■□□□□ 0.46
EPB41P11171 AL365203.3-201ENST00000609742 2057 ntBASIC17.91■□□□□ 0.46
EPB41P11171 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 MIR940-201ENST00000401276 94 ntBASIC17.9■□□□□ 0.46
EPB41P11171 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.9■□□□□ 0.46
EPB41P11171 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPB41P11171 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.9■□□□□ 0.46
EPB41P11171 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
EPB41P11171 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms