Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.75□□□□□ -0.37
CD28P10747 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 AC084018.2-201ENST00000613093 2607 ntBASIC12.75□□□□□ -0.37
CD28P10747 TEX28P1-201ENST00000613479 1221 ntBASIC12.75□□□□□ -0.37
CD28P10747 TEX28P2-201ENST00000617764 1221 ntBASIC12.75□□□□□ -0.37
CD28P10747 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.75□□□□□ -0.37
CD28P10747 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC12.75□□□□□ -0.37
CD28P10747 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CD28P10747 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 AL512652.2-201ENST00000625156 1716 ntBASIC12.74□□□□□ -0.37
CD28P10747 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.74□□□□□ -0.37
CD28P10747 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CD28P10747 PIN1P1-201ENST00000412108 996 ntBASIC12.74□□□□□ -0.37
CD28P10747 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.74□□□□□ -0.37
CD28P10747 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 BANF1P1-201ENST00000553684 263 ntBASIC12.74□□□□□ -0.37
CD28P10747 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.74□□□□□ -0.37
CD28P10747 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 AC027307.3-201ENST00000594262 1100 ntBASIC12.74□□□□□ -0.37
CD28P10747 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.74□□□□□ -0.37
CD28P10747 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CD28P10747 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.74□□□□□ -0.37
CD28P10747 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CD28P10747 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.73□□□□□ -0.37
CD28P10747 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD28P10747 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms