Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HNRNPCL4P0DMR1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC092474.2-201ENST00000424288 719 ntBASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC093724.1-201ENST00000448659 1027 ntBASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HNRNPCL4P0DMR1 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 AC132872.4-202ENST00000622924 2756 ntBASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 FLJ16779-201ENST00000612722 7638 ntBASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 Z83851.2-201ENST00000609564 659 ntBASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HNRNPCL4P0DMR1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms