Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 AL079307.3-201ENST00000556114 283 ntBASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 DOC2GP-204ENST00000639052 2548 ntBASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RAB40ALP0C0E4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AL645728.1-201ENST00000366221 2101 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AL589702.1-201ENST00000641229 1509 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ZNF890P-202ENST00000530367 1156 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AC026979.3-201ENST00000607315 403 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AC004233.3-201ENST00000607794 1269 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 AC012645.4-201ENST00000610691 1061 ntBASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RAB40ALP0C0E4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC005034.1-201ENST00000426657 489 ntBASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SPTLC1P1-201ENST00000447199 261 ntBASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAB40ALP0C0E4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms