Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
RETP07949 SLC7A15P-201ENST00000424028 1363 ntBASIC16.41■□□□□ 0.22
RETP07949 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.41■□□□□ 0.22
RETP07949 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RETP07949 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RETP07949 FAM220BP-201ENST00000377689 816 ntBASIC16.41■□□□□ 0.22
RETP07949 SLC25A1P3-201ENST00000395415 828 ntBASIC16.41■□□□□ 0.22
RETP07949 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.41■□□□□ 0.22
RETP07949 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.41■□□□□ 0.22
RETP07949 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.41■□□□□ 0.22
RETP07949 RN7SL618P-201ENST00000477850 296 ntBASIC16.41■□□□□ 0.22
RETP07949 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.41■□□□□ 0.22
RETP07949 AC055876.2-201ENST00000531834 546 ntBASIC16.41■□□□□ 0.22
RETP07949 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 SPTSSB-204ENST00000617024 1292 ntBASIC16.41■□□□□ 0.22
RETP07949 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RETP07949 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
RETP07949 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.41■□□□□ 0.22
RETP07949 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RETP07949 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RETP07949 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RETP07949 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.4■□□□□ 0.22
RETP07949 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 PRYP6-201ENST00000514804 343 ntBASIC16.4■□□□□ 0.22
RETP07949 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RETP07949 AL079307.3-201ENST00000556114 283 ntBASIC16.4■□□□□ 0.22
RETP07949 AC105021.1-202ENST00000570572 669 ntBASIC16.4■□□□□ 0.22
RETP07949 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RETP07949 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.4■□□□□ 0.22
RETP07949 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.4■□□□□ 0.22
RETP07949 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RETP07949 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RETP07949 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
RETP07949 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RETP07949 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 AC131009.4-201ENST00000624048 1740 ntBASIC16.39■□□□□ 0.21
RETP07949 AC093525.9-201ENST00000624961 1746 ntBASIC16.39■□□□□ 0.21
RETP07949 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RETP07949 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RETP07949 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RETP07949 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RETP07949 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.39■□□□□ 0.21
RETP07949 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 AL080243.2-201ENST00000418783 582 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms