Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 FAM220BP-201ENST00000377689 816 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 MIR1233-2-201ENST00000408138 82 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 MIR1233-1-201ENST00000408722 82 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 AP006288.1-201ENST00000446065 395 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 AC245100.5-201ENST00000452108 331 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 AC004967.1-201ENST00000453589 447 ntBASIC16.51■□□□□ 0.23
HLA-DQB2P05538 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-DQB2P05538 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 HLA-H-201ENST00000383620 1096 ntBASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 LINC02447-202ENST00000501888 2146 ntBASIC16.5■□□□□ 0.23
HLA-DQB2P05538 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC004835.2-201ENST00000603762 682 ntBASIC16.5■□□□□ 0.23
HLA-DQB2P05538 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC008677.1-201ENST00000519230 1561 ntBASIC16.5■□□□□ 0.23
HLA-DQB2P05538 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 AC069224.1-201ENST00000566372 1715 ntBASIC16.5■□□□□ 0.23
HLA-DQB2P05538 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-DQB2P05538 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AL365203.3-201ENST00000609742 2057 ntBASIC16.49■□□□□ 0.23
HLA-DQB2P05538 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 HAUS4P1-201ENST00000406739 1145 ntBASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC254562.1-201ENST00000417586 456 ntBASIC16.49■□□□□ 0.23
HLA-DQB2P05538 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 GPS2P2-201ENST00000430745 888 ntBASIC16.49■□□□□ 0.23
HLA-DQB2P05538 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AP3S2-216ENST00000617003 1561 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms