Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA1P02708 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.58■□□□□ 0.4
CHRNA1P02708 AL391069.4-201ENST00000609583 481 ntBASIC17.58■□□□□ 0.4
CHRNA1P02708 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHRNA1P02708 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA1P02708 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA1P02708 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
CHRNA1P02708 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 MIR658-201ENST00000385210 100 ntBASIC17.57■□□□□ 0.4
CHRNA1P02708 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA1P02708 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA1P02708 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 AC092552.1-201ENST00000547243 906 ntBASIC17.57■□□□□ 0.4
CHRNA1P02708 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
CHRNA1P02708 AL512343.1-201ENST00000605837 169 ntBASIC17.57■□□□□ 0.4
CHRNA1P02708 MIR6805-201ENST00000615055 62 ntBASIC17.57■□□□□ 0.4
CHRNA1P02708 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.57■□□□□ 0.4
CHRNA1P02708 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 AL033527.5-201ENST00000641382 801 ntBASIC17.57■□□□□ 0.4
CHRNA1P02708 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA1P02708 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA1P02708 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA1P02708 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHRNA1P02708 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRNA1P02708 RPS2P32-201ENST00000439199 892 ntBASIC17.56■□□□□ 0.4
CHRNA1P02708 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 RN7SL399P-201ENST00000471648 279 ntBASIC17.56■□□□□ 0.4
CHRNA1P02708 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.56■□□□□ 0.4
CHRNA1P02708 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHRNA1P02708 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CHRNA1P02708 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA1P02708 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA1P02708 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA1P02708 KRT8P37-201ENST00000451609 1420 ntBASIC17.55■□□□□ 0.4
CHRNA1P02708 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA1P02708 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms