Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.2■□□□□ 0.34
RTN3O95197 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.2■□□□□ 0.34
RTN3O95197 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.2■□□□□ 0.34
RTN3O95197 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 MIR943-201ENST00000401286 94 ntBASIC17.2■□□□□ 0.34
RTN3O95197 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTN3O95197 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.2■□□□□ 0.34
RTN3O95197 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 AC069120.2-201ENST00000524091 540 ntBASIC17.2■□□□□ 0.34
RTN3O95197 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.2■□□□□ 0.34
RTN3O95197 AC011467.4-201ENST00000594891 528 ntBASIC17.2■□□□□ 0.34
RTN3O95197 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 AL589702.1-201ENST00000641229 1509 ntBASIC17.2■□□□□ 0.34
RTN3O95197 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RTN3O95197 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTN3O95197 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.19■□□□□ 0.34
RTN3O95197 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.19■□□□□ 0.34
RTN3O95197 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.19■□□□□ 0.34
RTN3O95197 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.19■□□□□ 0.34
RTN3O95197 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.19■□□□□ 0.34
RTN3O95197 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 AL158211.3-201ENST00000607385 239 ntBASIC17.19■□□□□ 0.34
RTN3O95197 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RTN3O95197 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTN3O95197 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTN3O95197 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 AL035456.1-201ENST00000456064 1369 ntBASIC17.18■□□□□ 0.34
RTN3O95197 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.18■□□□□ 0.34
RTN3O95197 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.18■□□□□ 0.34
RTN3O95197 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RTN3O95197 AC055876.3-201ENST00000431496 288 ntBASIC17.18■□□□□ 0.34
RTN3O95197 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.18■□□□□ 0.34
RTN3O95197 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.18■□□□□ 0.34
RTN3O95197 AC005498.2-205ENST00000593218 784 ntBASIC17.18■□□□□ 0.34
RTN3O95197 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.18■□□□□ 0.34
RTN3O95197 AC138649.4-201ENST00000612222 287 ntBASIC17.18■□□□□ 0.34
RTN3O95197 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTN3O95197 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms