Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
BEST1O76090 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.04■□□□□ 0.32
BEST1O76090 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.04■□□□□ 0.32
BEST1O76090 CETN4P-206ENST00000642099 2168 ntBASIC17.04■□□□□ 0.32
BEST1O76090 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 CYP4F24P-201ENST00000586049 1580 ntBASIC17.03■□□□□ 0.32
BEST1O76090 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST1O76090 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST1O76090 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST1O76090 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BEST1O76090 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
BEST1O76090 BCRP1-201ENST00000444246 691 ntBASIC17.03■□□□□ 0.32
BEST1O76090 UGT1A2P-201ENST00000454886 866 ntBASIC17.03■□□□□ 0.32
BEST1O76090 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST1O76090 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST1O76090 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST1O76090 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.03■□□□□ 0.32
BEST1O76090 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST1O76090 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.03■□□□□ 0.32
BEST1O76090 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BEST1O76090 AL691432.1-201ENST00000596308 1422 ntBASIC17.03■□□□□ 0.32
BEST1O76090 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.03■□□□□ 0.32
BEST1O76090 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
BEST1O76090 AC124067.4-201ENST00000519691 2379 ntBASIC17.02■□□□□ 0.32
BEST1O76090 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BEST1O76090 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST1O76090 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST1O76090 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.02■□□□□ 0.32
BEST1O76090 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.02■□□□□ 0.32
BEST1O76090 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BEST1O76090 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.02■□□□□ 0.31
BEST1O76090 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
BEST1O76090 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
BEST1O76090 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BEST1O76090 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.01■□□□□ 0.31
BEST1O76090 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST1O76090 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.01■□□□□ 0.31
BEST1O76090 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 BASP1P1-201ENST00000430708 665 ntBASIC17.01■□□□□ 0.31
BEST1O76090 AC241585.1-201ENST00000433527 519 ntBASIC17.01■□□□□ 0.31
BEST1O76090 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.01■□□□□ 0.31
BEST1O76090 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.01■□□□□ 0.31
BEST1O76090 AC004890.2-204ENST00000481968 304 ntBASIC17.01■□□□□ 0.31
BEST1O76090 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BEST1O76090 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.01■□□□□ 0.31
BEST1O76090 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.01■□□□□ 0.31
BEST1O76090 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
BEST1O76090 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.01■□□□□ 0.31
BEST1O76090 AL096865.1-201ENST00000606796 927 ntBASIC17.01■□□□□ 0.31
BEST1O76090 AC026979.3-201ENST00000607315 403 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms