Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
PRAMEF11O60813 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRAMEF11O60813 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 TUBB3P1-201ENST00000405796 1332 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 DOC2GP-204ENST00000639052 2548 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 AL513523.2-202ENST00000427283 2040 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 PMS2P2-201ENST00000425039 1128 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 AL139010.1-201ENST00000454878 894 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 AC051619.7-201ENST00000568314 623 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 AL035456.1-201ENST00000456064 1369 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 AL391005.1-201ENST00000623953 2435 ntBASIC16.47■□□□□ 0.23
PRAMEF11O60813 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.47■□□□□ 0.23
PRAMEF11O60813 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRAMEF11O60813 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 AC026691.1-201ENST00000602502 2017 ntBASIC16.46■□□□□ 0.23
PRAMEF11O60813 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 AL691432.1-201ENST00000596308 1422 ntBASIC16.46■□□□□ 0.23
PRAMEF11O60813 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 AL645939.2-201ENST00000427340 991 ntBASIC16.46■□□□□ 0.23
PRAMEF11O60813 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 AC067863.1-201ENST00000494933 530 ntBASIC16.46■□□□□ 0.23
PRAMEF11O60813 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.46■□□□□ 0.23
PRAMEF11O60813 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRAMEF11O60813 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms