Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 TUBBP5-203ENST00000508529 1334 ntBASIC15.62■□□□□ 0.09
GFRA3O60609 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
GFRA3O60609 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.62■□□□□ 0.09
GFRA3O60609 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.62■□□□□ 0.09
GFRA3O60609 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
GFRA3O60609 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
GFRA3O60609 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.61■□□□□ 0.09
GFRA3O60609 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 AC025271.4-201ENST00000621477 1726 ntBASIC15.61■□□□□ 0.09
GFRA3O60609 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.61■□□□□ 0.09
GFRA3O60609 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
GFRA3O60609 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.61■□□□□ 0.09
GFRA3O60609 FGFR3P1-201ENST00000449999 601 ntBASIC15.61■□□□□ 0.09
GFRA3O60609 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 SERPINA13P-202ENST00000478994 924 ntBASIC15.61■□□□□ 0.09
GFRA3O60609 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.61■□□□□ 0.09
GFRA3O60609 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.61■□□□□ 0.09
GFRA3O60609 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.61■□□□□ 0.09
GFRA3O60609 AC132192.2-201ENST00000596206 1147 ntBASIC15.61■□□□□ 0.09
GFRA3O60609 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.61■□□□□ 0.09
GFRA3O60609 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.61■□□□□ 0.09
GFRA3O60609 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
GFRA3O60609 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.61■□□□□ 0.09
GFRA3O60609 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GFRA3O60609 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
GFRA3O60609 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.6■□□□□ 0.09
GFRA3O60609 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.6■□□□□ 0.09
GFRA3O60609 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 AL138781.2-201ENST00000617896 1843 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 RPSAP31-201ENST00000416648 895 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.6■□□□□ 0.09
GFRA3O60609 AL157792.1-201ENST00000488281 530 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
GFRA3O60609 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 AP003392.6-201ENST00000607709 325 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GFRA3O60609 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GFRA3O60609 AL671710.1-201ENST00000610245 2349 ntBASIC15.6■□□□□ 0.09
GFRA3O60609 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.6■□□□□ 0.09
GFRA3O60609 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.6■□□□□ 0.09
GFRA3O60609 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
GFRA3O60609 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms