Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
DLX3O60479 AL049840.3-201ENST00000602669 611 ntBASIC16■□□□□ 0.15
DLX3O60479 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
DLX3O60479 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
DLX3O60479 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16■□□□□ 0.15
DLX3O60479 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16■□□□□ 0.15
DLX3O60479 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DLX3O60479 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16■□□□□ 0.15
DLX3O60479 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16■□□□□ 0.15
DLX3O60479 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16■□□□□ 0.15
DLX3O60479 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16■□□□□ 0.15
DLX3O60479 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16■□□□□ 0.15
DLX3O60479 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
DLX3O60479 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16■□□□□ 0.15
DLX3O60479 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.99■□□□□ 0.15
DLX3O60479 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.99■□□□□ 0.15
DLX3O60479 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
DLX3O60479 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
DLX3O60479 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.99■□□□□ 0.15
DLX3O60479 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 HAUS4P1-201ENST00000406739 1145 ntBASIC15.99■□□□□ 0.15
DLX3O60479 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.99■□□□□ 0.15
DLX3O60479 VN2R19P-201ENST00000442399 1052 ntBASIC15.99■□□□□ 0.15
DLX3O60479 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 AP002469.2-201ENST00000531724 424 ntBASIC15.99■□□□□ 0.15
DLX3O60479 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.99■□□□□ 0.15
DLX3O60479 AC023824.1-201ENST00000562945 2975 ntBASIC15.99■□□□□ 0.15
DLX3O60479 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
DLX3O60479 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.99■□□□□ 0.15
DLX3O60479 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.99■□□□□ 0.15
DLX3O60479 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.99■□□□□ 0.15
DLX3O60479 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.99■□□□□ 0.15
DLX3O60479 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
DLX3O60479 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
DLX3O60479 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.98■□□□□ 0.15
DLX3O60479 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.98■□□□□ 0.15
DLX3O60479 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.98■□□□□ 0.15
DLX3O60479 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.98■□□□□ 0.15
DLX3O60479 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
DLX3O60479 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 SSR4P1-203ENST00000599569 2260 ntBASIC15.98■□□□□ 0.15
DLX3O60479 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 AC092850.2-201ENST00000623821 2697 ntBASIC15.98■□□□□ 0.15
DLX3O60479 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
DLX3O60479 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.98■□□□□ 0.15
DLX3O60479 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms