Protein–RNA interactions for Protein: O43761

SYNGR3, Synaptogyrin-3, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3O43761 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.22□□□□□ -0.13
SYNGR3O43761 PMS2P2-201ENST00000425039 1128 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 AC005237.2-201ENST00000434368 219 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 METTL21AP1-201ENST00000438852 635 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 AL592309.1-201ENST00000443127 649 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 AC079140.1-201ENST00000508039 487 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 KRT8P48-201ENST00000515599 1220 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 AC105233.2-201ENST00000523697 349 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 AF228730.5-201ENST00000530288 346 ntBASIC14.22□□□□□ -0.13
SYNGR3O43761 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.22□□□□□ -0.13
SYNGR3O43761 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.22□□□□□ -0.13
SYNGR3O43761 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SYNGR3O43761 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SYNGR3O43761 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.21□□□□□ -0.13
SYNGR3O43761 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.21□□□□□ -0.13
SYNGR3O43761 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.21□□□□□ -0.13
SYNGR3O43761 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
SYNGR3O43761 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SYNGR3O43761 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
SYNGR3O43761 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AC245100.5-201ENST00000452108 331 ntBASIC14.21□□□□□ -0.13
SYNGR3O43761 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 IGHV3-62-201ENST00000520057 340 ntBASIC14.21□□□□□ -0.13
SYNGR3O43761 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AC243562.1-201ENST00000560672 389 ntBASIC14.21□□□□□ -0.13
SYNGR3O43761 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.21□□□□□ -0.13
SYNGR3O43761 AC027612.4-201ENST00000605371 583 ntBASIC14.21□□□□□ -0.13
SYNGR3O43761 AC008267.7-201ENST00000624570 1194 ntBASIC14.21□□□□□ -0.13
SYNGR3O43761 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.21□□□□□ -0.13
SYNGR3O43761 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SYNGR3O43761 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SYNGR3O43761 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SYNGR3O43761 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.21□□□□□ -0.14
SYNGR3O43761 CDC14C-201ENST00000428251 1719 ntBASIC14.21□□□□□ -0.14
SYNGR3O43761 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SYNGR3O43761 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SYNGR3O43761 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SYNGR3O43761 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SYNGR3O43761 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
SYNGR3O43761 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
SYNGR3O43761 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
SYNGR3O43761 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.2□□□□□ -0.14
SYNGR3O43761 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SYNGR3O43761 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.2□□□□□ -0.14
SYNGR3O43761 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SYNGR3O43761 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SYNGR3O43761 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms