Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.9■□□□□ 0.3
MSI1O43347 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 AC140878.1-201ENST00000565277 250 ntBASIC16.9■□□□□ 0.3
MSI1O43347 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.9■□□□□ 0.3
MSI1O43347 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.9■□□□□ 0.3
MSI1O43347 AC024267.1-201ENST00000582320 895 ntBASIC16.9■□□□□ 0.3
MSI1O43347 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.9■□□□□ 0.3
MSI1O43347 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.9■□□□□ 0.3
MSI1O43347 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
MSI1O43347 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MSI1O43347 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MSI1O43347 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MSI1O43347 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
MSI1O43347 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.89■□□□□ 0.29
MSI1O43347 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MSI1O43347 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MSI1O43347 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.89■□□□□ 0.29
MSI1O43347 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 MTND6P24-201ENST00000440466 518 ntBASIC16.89■□□□□ 0.29
MSI1O43347 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 AC105021.1-202ENST00000570572 669 ntBASIC16.89■□□□□ 0.29
MSI1O43347 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.89■□□□□ 0.29
MSI1O43347 SPDYE12P-201ENST00000618416 771 ntBASIC16.89■□□□□ 0.29
MSI1O43347 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MSI1O43347 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.89■□□□□ 0.29
MSI1O43347 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MSI1O43347 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSI1O43347 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
MSI1O43347 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSI1O43347 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MSI1O43347 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.88■□□□□ 0.29
MSI1O43347 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 IGHV3-42-201ENST00000520410 361 ntBASIC16.88■□□□□ 0.29
MSI1O43347 AC069120.2-201ENST00000524091 540 ntBASIC16.88■□□□□ 0.29
MSI1O43347 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.88■□□□□ 0.29
MSI1O43347 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.88■□□□□ 0.29
MSI1O43347 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MSI1O43347 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
MSI1O43347 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.88■□□□□ 0.29
MSI1O43347 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MSI1O43347 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms