Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 HLA-A-202ENST00000376806 1854 ntBASIC22.15■■□□□ 1.14
CHD2O14647 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC22.15■■□□□ 1.14
CHD2O14647 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC22.15■■□□□ 1.14
CHD2O14647 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.15■■□□□ 1.14
CHD2O14647 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 MIR33B-201ENST00000385104 96 ntBASIC22.15■■□□□ 1.14
CHD2O14647 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC22.15■■□□□ 1.14
CHD2O14647 IMP3P2-201ENST00000489760 475 ntBASIC22.15■■□□□ 1.14
CHD2O14647 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CHD2O14647 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC22.15■■□□□ 1.14
CHD2O14647 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHD2O14647 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
CHD2O14647 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CHD2O14647 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
CHD2O14647 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHD2O14647 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHD2O14647 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC22.14■■□□□ 1.14
CHD2O14647 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHD2O14647 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.14■■□□□ 1.13
CHD2O14647 AL133267.1-201ENST00000398220 340 ntBASIC22.14■■□□□ 1.13
CHD2O14647 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC22.14■■□□□ 1.13
CHD2O14647 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD2O14647 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC22.14■■□□□ 1.13
CHD2O14647 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD2O14647 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD2O14647 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 AL451050.2-201ENST00000606967 682 ntBASIC22.14■■□□□ 1.13
CHD2O14647 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.14■■□□□ 1.13
CHD2O14647 AC006453.4-201ENST00000636949 1252 ntBASIC22.14■■□□□ 1.13
CHD2O14647 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHD2O14647 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHD2O14647 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC22.14■■□□□ 1.13
CHD2O14647 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD2O14647 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD2O14647 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 HNRNPA1P32-201ENST00000396326 963 ntBASIC22.13■■□□□ 1.13
CHD2O14647 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD2O14647 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD2O14647 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHD2O14647 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 AC128714.1-201ENST00000637035 887 ntBASIC22.13■■□□□ 1.13
CHD2O14647 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
CHD2O14647 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC22.13■■□□□ 1.13
CHD2O14647 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CHD2O14647 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC22.13■■□□□ 1.13
CHD2O14647 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC22.13■■□□□ 1.13
CHD2O14647 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHD2O14647 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC22.13■■□□□ 1.13
CHD2O14647 AC009053.2-201ENST00000563701 2365 ntBASIC22.12■■□□□ 1.13
CHD2O14647 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD2O14647 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD2O14647 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD2O14647 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD2O14647 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHD2O14647 LDHBP1-201ENST00000455730 1119 ntBASIC22.12■■□□□ 1.13
CHD2O14647 POU5F1P6-201ENST00000466990 990 ntBASIC22.12■■□□□ 1.13
CHD2O14647 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD2O14647 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD2O14647 AL450472.2-201ENST00000603663 1156 ntBASIC22.12■■□□□ 1.13
CHD2O14647 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD2O14647 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD2O14647 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD2O14647 PCDHB18P-201ENST00000524813 2368 ntBASIC22.12■■□□□ 1.13
CHD2O14647 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD2O14647 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD2O14647 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms