Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SOX1O00570 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SOX1O00570 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX1O00570 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX1O00570 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
SOX1O00570 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX1O00570 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 AC074338.1-201ENST00000416825 156 ntBASIC17.1■□□□□ 0.33
SOX1O00570 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 AC007274.2-201ENST00000421675 662 ntBASIC17.1■□□□□ 0.33
SOX1O00570 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX1O00570 AL596276.2-201ENST00000447525 331 ntBASIC17.1■□□□□ 0.33
SOX1O00570 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX1O00570 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX1O00570 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX1O00570 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX1O00570 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SOX1O00570 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SOX1O00570 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SOX1O00570 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX1O00570 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.1■□□□□ 0.33
SOX1O00570 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SOX1O00570 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX1O00570 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX1O00570 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SOX1O00570 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.09■□□□□ 0.33
SOX1O00570 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 HSPB1P2-201ENST00000448722 546 ntBASIC17.09■□□□□ 0.33
SOX1O00570 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.09■□□□□ 0.33
SOX1O00570 AL590640.2-201ENST00000457038 527 ntBASIC17.09■□□□□ 0.33
SOX1O00570 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SOX1O00570 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 AF254983.2-201ENST00000612331 135 ntBASIC17.09■□□□□ 0.33
SOX1O00570 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 AC008132.1-202ENST00000342005 1389 ntBASIC17.09■□□□□ 0.33
SOX1O00570 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SOX1O00570 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX1O00570 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX1O00570 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX1O00570 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX1O00570 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SOX1O00570 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.08■□□□□ 0.33
SOX1O00570 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.08■□□□□ 0.33
SOX1O00570 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.08■□□□□ 0.33
SOX1O00570 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SOX1O00570 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX1O00570 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SOX1O00570 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SOX1O00570 TUBBP5-203ENST00000508529 1334 ntBASIC17.08■□□□□ 0.32
SOX1O00570 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX1O00570 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.08■□□□□ 0.32
SOX1O00570 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.08■□□□□ 0.32
SOX1O00570 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX1O00570 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.08■□□□□ 0.32
SOX1O00570 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX1O00570 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SOX1O00570 AL139011.1-202ENST00000642063 584 ntBASIC17.08■□□□□ 0.32
SOX1O00570 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX1O00570 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SOX1O00570 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SOX1O00570 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms