Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NFKBIEO00221 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.33■□□□□ 0.69
NFKBIEO00221 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NFKBIEO00221 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NFKBIEO00221 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NFKBIEO00221 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.33■□□□□ 0.69
NFKBIEO00221 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
NFKBIEO00221 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.33■□□□□ 0.68
NFKBIEO00221 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.33■□□□□ 0.68
NFKBIEO00221 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.33■□□□□ 0.68
NFKBIEO00221 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC19.33■□□□□ 0.68
NFKBIEO00221 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
NFKBIEO00221 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.33■□□□□ 0.68
NFKBIEO00221 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 AC138627.1-207ENST00000641560 1006 ntBASIC19.33■□□□□ 0.68
NFKBIEO00221 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.33■□□□□ 0.68
NFKBIEO00221 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.33■□□□□ 0.68
NFKBIEO00221 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NFKBIEO00221 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
NFKBIEO00221 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC009053.2-201ENST00000563701 2365 ntBASIC19.32■□□□□ 0.68
NFKBIEO00221 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKBIEO00221 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKBIEO00221 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 HOMER2P2-201ENST00000451621 847 ntBASIC19.32■□□□□ 0.68
NFKBIEO00221 LDHBP1-201ENST00000455730 1119 ntBASIC19.32■□□□□ 0.68
NFKBIEO00221 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.32■□□□□ 0.68
NFKBIEO00221 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.32■□□□□ 0.68
NFKBIEO00221 SPCS2P2-201ENST00000603270 608 ntBASIC19.32■□□□□ 0.68
NFKBIEO00221 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.32■□□□□ 0.68
NFKBIEO00221 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKBIEO00221 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKBIEO00221 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.32■□□□□ 0.68
NFKBIEO00221 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NFKBIEO00221 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NFKBIEO00221 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.32■□□□□ 0.68
NFKBIEO00221 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKBIEO00221 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.31■□□□□ 0.68
NFKBIEO00221 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.31■□□□□ 0.68
NFKBIEO00221 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
NFKBIEO00221 AC253536.4-201ENST00000440539 267 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.31■□□□□ 0.68
NFKBIEO00221 RPS2P36-201ENST00000456516 831 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NFKBIEO00221 RN7SL769P-201ENST00000469386 295 ntBASIC19.31■□□□□ 0.68
NFKBIEO00221 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NFKBIEO00221 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms