Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA2E9PIF3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 PCDHA14-201ENST00000506751 2298 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC079328.2-201ENST00000561241 3354 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC097493.3-201ENST00000509725 367 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RARRES2P9-201ENST00000565168 469 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AL158211.3-201ENST00000607385 239 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC018529.1-201ENST00000613063 361 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 SNX33P1-201ENST00000592116 1762 ntBASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA2E9PIF3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 AC092171.3-201ENST00000610122 2651 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TSPY16P-201ENST00000449843 468 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 COX20P2-201ENST00000452636 358 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 AC073389.1-201ENST00000595595 795 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 AC063926.3-201ENST00000624734 5658 ntBASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NPIPA2E9PIF3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.85□□□□□ -0.03
NPIPA2E9PIF3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms