Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.62□□□□□ -0.07
TVP23AA6NH52 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 MIR4515-201ENST00000584082 81 ntBASIC14.62□□□□□ -0.07
TVP23AA6NH52 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 AC067930.6-201ENST00000623257 4947 ntBASIC14.62□□□□□ -0.07
TVP23AA6NH52 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TVP23AA6NH52 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TVP23AA6NH52 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CDC14C-201ENST00000428251 1719 ntBASIC14.61□□□□□ -0.07
TVP23AA6NH52 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 HMGA1P7-201ENST00000406908 502 ntBASIC14.61□□□□□ -0.07
TVP23AA6NH52 AC108751.1-201ENST00000490852 363 ntBASIC14.61□□□□□ -0.07
TVP23AA6NH52 LINC02447-202ENST00000501888 2146 ntBASIC14.61□□□□□ -0.07
TVP23AA6NH52 CXCL1P1-201ENST00000502804 216 ntBASIC14.61□□□□□ -0.07
TVP23AA6NH52 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.61□□□□□ -0.07
TVP23AA6NH52 AP002414.2-201ENST00000591780 3365 ntBASIC14.6□□□□□ -0.07
TVP23AA6NH52 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TVP23AA6NH52 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms