Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPDYE9P-201ENST00000570642 692 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPDYE10P-202ENST00000612005 668 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SPDYE8P-202ENST00000612377 668 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC105339.1-204ENST00000636249 355 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC012569.1-201ENST00000591191 1524 ntBASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC005052.1-201ENST00000625181 2492 ntBASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TCRBV4S1A1TA0A5B7 GGT3P-204ENST00000453783 1664 ntBASIC13.15□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC004461.1-201ENST00000412461 403 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC005237.2-201ENST00000434368 219 ntBASIC13.14□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms