Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRDV1A0A1B0GX56 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ARMC10P1-201ENST00000313754 855 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC064862.7-201ENST00000604520 867 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC006011.2-201ENST00000621313 1158 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC090616.6-203ENST00000579186 1945 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 AC105250.1-201ENST00000509378 2057 ntBASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRDV1A0A1B0GX56 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 AL139424.1-201ENST00000607572 797 ntBASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 NSUN5P1-202ENST00000421140 1535 ntBASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 NSUN5P2-203ENST00000457352 1529 ntBASIC14.36□□□□□ -0.11
TRDV1A0A1B0GX56 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.35□□□□□ -0.11
TRDV1A0A1B0GX56 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms