Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MIR648-201ENST00000385046 94 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 DUSP5P1-201ENST00000441325 1139 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL592424.1-201ENST00000563624 1536 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CICP24-201ENST00000605464 2705 ntBASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV6-7A0A0A0MS04 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 F11R-206ENST00000621309 4770 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 IGHV3-65-201ENST00000523210 341 ntBASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 OR7E14P-202ENST00000530490 1290 ntBASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC020658.6-201ENST00000623564 1870 ntBASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC005089.1-201ENST00000619486 2241 ntBASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC026748.1-201ENST00000624349 3251 ntBASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AC012569.1-201ENST00000591191 1524 ntBASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV6-7A0A0A0MS04 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms