Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 AC093512.1-201ENST00000617969 520 ntBASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 AC005622.1-201ENST00000636801 1703 ntBASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL4A3BPQ9Y5P4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 CNN2P2-201ENST00000443536 909 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 CNN2P3-201ENST00000450201 906 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ALG1L8P-201ENST00000533887 760 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC069262.1-201ENST00000539058 672 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AL136317.3-201ENST00000618497 906 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC073439.1-201ENST00000624121 1774 ntBASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL4A3BPQ9Y5P4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.23■□□□□ 0.51
COL4A3BPQ9Y5P4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms