Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 AC023141.5-201ENST00000458585 616 ntBASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 Z92544.3-201ENST00000624747 417 ntBASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.51■□□□□ 0.23
RAI2Q9Y5P3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 AC012645.4-201ENST00000610691 1061 ntBASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAI2Q9Y5P3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 AC006449.6-201ENST00000612330 2296 ntBASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 AL390955.2-201ENST00000603032 514 ntBASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 AL008721.1-201ENST00000609964 604 ntBASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 AC009093.7-201ENST00000623853 1223 ntBASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAI2Q9Y5P3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAI2Q9Y5P3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms