Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CRYGEP-201ENST00000412192 528 ntBASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 AC020765.3-201ENST00000613051 740 ntBASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.65□□□□□ -0.06
POLR1DQ9Y2S0 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AL391005.1-201ENST00000623953 2435 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 OR2I1P-210ENST00000642037 4691 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 LINC01144-201ENST00000626198 1710 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 ACTL9-202ENST00000612068 1252 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AC116407.3-201ENST00000623905 1129 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AC026691.1-201ENST00000602502 2017 ntBASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.64□□□□□ -0.07
POLR1DQ9Y2S0 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
POLR1DQ9Y2S0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms