Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHA7Q9UN72 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 HAUS4P1-201ENST00000406739 1145 ntBASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 KRT18P2-201ENST00000447938 1258 ntBASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 AC018845.2-201ENST00000568326 409 ntBASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHA7Q9UN72 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.52■□□□□ 0.55
PCDHA7Q9UN72 DBET-201ENST00000630918 3363 ntBASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AL662844.1-201ENST00000546340 181 ntBASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AC034105.1-201ENST00000563488 319 ntBASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 AC022532.1-201ENST00000624563 1728 ntBASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHA7Q9UN72 PPT1-215ENST00000641471 2368 ntBASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 BCAR1-209ENST00000546196 1340 ntBASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHA7Q9UN72 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms