Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 CRB3P1-201ENST00000449338 276 ntBASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AC004233.3-201ENST00000607794 1269 ntBASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AL033527.5-202ENST00000641632 1098 ntBASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 AC135586.1-201ENST00000539323 574 ntBASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.65■□□□□ 0.74
DENND2AQ9ULE3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DENND2AQ9ULE3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
DENND2AQ9ULE3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DENND2AQ9ULE3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms