Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MRPS18AP1-201ENST00000414458 589 ntBASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 AC002472.2-201ENST00000442739 958 ntBASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 RN7SL204P-201ENST00000582831 262 ntBASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.48□□□□□ -0.09
CLCF1Q9UBD9 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AC022144.1-201ENST00000602255 1580 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AC087499.5-201ENST00000452760 1342 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AL035633.1-201ENST00000406139 838 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AC009477.1-201ENST00000452936 217 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AC138761.1-201ENST00000584393 385 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 MIR4321-201ENST00000592276 80 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 AL844908.2-201ENST00000609461 460 ntBASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLCF1Q9UBD9 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 TERF1P3-201ENST00000505638 1227 ntBASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.46□□□□□ -0.09
CLCF1Q9UBD9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms